Pseudomonas syringae pv. tomato DC3000, PSPTO_3706 (acdA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3706
NCBI Old Locus TagPSPTO3706
Name
acdA
Synonym: PSPTO3706
Replicon chromosome
Genomic location 4180427 - 4181578 (+ strand)

Cross-References

RefSeq NP_793480.1
GI 28870861
Entrez 1185371
INSDC AAO57175.1
NCBI Locus Tag PSPTO_3706
NCBI Old Locus Tag PSPTO3706
UniParc UPI0000009051
UniProtKB Acc Q87YT6
UniProtKB ID Q87YT6_PSESM
UniRef100 UniRef100_Q87YT6
UniRef50 UniRef50_Q4KC62
UniRef90 UniRef90_Q48KW8

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.32
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 472 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003019 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3706
Search term: acdA

Human Homologs

Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase short chain [Source:HGNC Symbol;Acc:HGNC:90]
E-value: 7.6e-93
Percent Identity: 48.3

References

No references are associated with this feature.