Pseudomonas syringae pv. tomato DC3000, PSPTO_3739

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3739
NCBI Old Locus Tag	PSPTO3739
Name	Synonym: PSPTO3739
Replicon	chromosome
Genomic location	4223245 - 4224360 (- strand)

Cross-References

RefSeq	NP_793513.1
GI	28870894
Entrez	1185407
INSDC	AAO57208.1
NCBI Locus Tag	PSPTO_3739
NCBI Old Locus Tag	PSPTO3739
UniParc	UPI0000009070
UniProtKB Acc	Q87YQ5
UniProtKB ID	Q87YQ5_PSESM
UniRef100	UniRef100_Q87YQ5
UniRef50	UniRef50_D7HXS5
UniRef90	UniRef90_D7HXS5

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.89
Kyte-Doolittle Hydrophobicity Value	-0.149
Molecular Weight (kDa)	41.5
Isoelectric Point (pI)	5.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015627 (151 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3739 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000467882 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 2.9e-20 Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14	ENSP00000467448 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 2.9e-20 Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14	ENSP00000467251 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 2.9e-20 Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14	ENSP00000376443 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 2.9e-20 Percent Identity: 30.9

References