Pseudomonas syringae pv. tomato DC3000, PSPTO_3800

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3800
NCBI Old Locus Tag	PSPTO3800
Name	Synonym: PSPTO3800
Replicon	chromosome
Genomic location	4303185 - 4304207 (- strand)

Cross-References

RefSeq	NP_793574.1
GI	28870955
Entrez	1185468
NCBI Locus Tag	PSPTO_3800
NCBI Old Locus Tag	PSPTO3800

Product

Feature Type	CDS
Coding Frame	1
Product Name	ISPsy7, transposase
Synonyms
Evidence for Translation
Charge (pH 7)	20.15
Kyte-Doolittle Hydrophobicity Value	-0.125
Molecular Weight (kDa)	37.7
Isoelectric Point (pI)	10.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000436 (232 members)
Putative Inparalogs	8 predicted inparalogs ISPsy7, transposase (PSPTO_3746) 100.0% identity ISPsy7, transposase (PSPTO_3325) 100.0% identity ISPsy7, transposase (PSPTO_3274) 99.7% identity ISPsy7, transposase (PSPTO_3146) 100.0% identity ISPsy7, transposase (PSPTO_2465) 99.7% identity ISPsy7, transposase (PSPTO_2167) 100.0% identity ISPsy7, transposase (PSPTO_0372) 100.0% identity ISPsy7, transposase (PSPTO_5571) 100.0% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3800 Search term: ISPsy7, transposase

Human Homologs

References