Pseudomonas syringae pv. tomato DC3000, PSPTO_3974 (tolR-2)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3974
NCBI Old Locus Tag	PSPTO3974
Name	tolR-2 Synonym: PSPTO3974
Replicon	chromosome
Genomic location	4481829 - 4482293 (- strand)

Cross-References

RefSeq	NP_793738.1
GI	28871119
Entrez	1185650
INSDC	AAO57433.1
NCBI Locus Tag	PSPTO_3974
NCBI Old Locus Tag	PSPTO3974
UniParc	UPI000000914C
UniProtKB Acc	Q87Y38
UniProtKB ID	Q87Y38_PSESM
UniRef100	UniRef100_A0A038GJ33
UniRef50	UniRef50_P50599
UniRef90	UniRef90_Q1I6F2

Product

Feature Type	CDS
Coding Frame	1
Product Name	tolR protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.98
Kyte-Doolittle Hydrophobicity Value	-0.021
Molecular Weight (kDa)	16.7
Isoelectric Point (pI)	9.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 287 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000935 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3974 Search term: tolR-2 Search term: tolR protein

Human Homologs

References