Pseudomonas syringae pv. tomato DC3000, PSPTO_3979 (ruvC)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3979
NCBI Old Locus Tag	PSPTO3979
Name	ruvC Synonym: PSPTO3979
Replicon	chromosome
Genomic location	4485374 - 4485904 (- strand)

Cross-References

RefSeq	NP_793743.1
GI	28871124
Entrez	1185655
INSDC	AAO57438.1
NCBI Locus Tag	PSPTO_3979
NCBI Old Locus Tag	PSPTO3979
UniParc	UPI0000009151
UniProtKB Acc	Q87Y33
UniProtKB ID	RUVC_PSESM
UniRef100	UniRef100_Q87Y33
UniRef50	UniRef50_Q87Y33
UniRef90	UniRef90_Q87Y33

Product

Feature Type	CDS
Coding Frame	1
Product Name	crossover junction endodeoxyribonuclease RuvC
Synonyms
Evidence for Translation
Charge (pH 7)	8.10
Kyte-Doolittle Hydrophobicity Value	0.060
Molecular Weight (kDa)	18.6
Isoelectric Point (pI)	9.98

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 536 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000930 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3979 Search term: ruvC Search term: crossover junction endodeoxyribonuclease RuvC

Human Homologs

References