Pseudomonas syringae pv. tomato DC3000, PSPTO_4031

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4031
NCBI Old Locus Tag	PSPTO4031
Name	Synonym: PSPTO4031
Replicon	chromosome
Genomic location	4539117 - 4540238 (+ strand)

Cross-References

RefSeq	NP_793793.1
GI	28871174
Entrez	1185710
INSDC	AAO57488.1
NCBI Locus Tag	PSPTO_4031
NCBI Old Locus Tag	PSPTO4031
UniParc	UPI000000917D
UniProtKB Acc	Q87XY9
UniProtKB ID	Q87XY9_PSESM
UniRef100	UniRef100_Q87XY9
UniRef50	UniRef50_G8QC58
UniRef90	UniRef90_Q87XY9

Product

Feature Type	CDS
Coding Frame	1
Product Name	decarboxylase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.96
Kyte-Doolittle Hydrophobicity Value	-0.300
Molecular Weight (kDa)	42.3
Isoelectric Point (pI)	6.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 364 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002059 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4031 Search term: decarboxylase family protein

Human Homologs

References