Pseudomonas syringae pv. tomato DC3000, PSPTO_4110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4110
NCBI Old Locus TagPSPTO4110
Name
Synonym: PSPTO4110
Replicon chromosome
Genomic location 4633906 - 4635171 (+ strand)

Cross-References

RefSeq NP_793871.1
GI 28871252
Entrez 1185790
INSDC AAO57566.1
NCBI Locus Tag PSPTO_4110
NCBI Old Locus Tag PSPTO4110
UniParc UPI00000091C6
UniProtKB Acc Q87XR6
UniProtKB ID Q87XR6_PSESM
UniRef100 UniRef100_Q87XR6
UniRef50 UniRef50_W9BPM1
UniRef90 UniRef90_F3EA06

Product

Feature Type CDS
Coding Frame 1
Product Name
leucine/isoleucine/valine transporter permease subunit
Synonyms
Evidence for Translation
Charge (pH 7) 10.38
Kyte-Doolittle Hydrophobicity Value 0.807
Molecular Weight (kDa) 46.2
Isoelectric Point (pI) 9.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 420 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001034 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4110

Human Homologs

References

No references are associated with this feature.