Pseudomonas syringae pv. tomato DC3000, PSPTO_4111

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4111
NCBI Old Locus TagPSPTO4111
Name
Synonym: PSPTO4111
Replicon chromosome
Genomic location 4635168 - 4635935 (+ strand)

Cross-References

RefSeq NP_793872.1
GI 28871253
Entrez 1185791
INSDC AAO57567.1
NCBI Locus Tag PSPTO_4111
NCBI Old Locus Tag PSPTO4111
UniParc UPI00000091C7
UniProtKB Acc Q87XR5
UniProtKB ID Q87XR5_PSESM
UniRef100 UniRef100_Q87XR5
UniRef50 UniRef50_P21629
UniRef90 UniRef90_S3MK68

Product

Feature Type CDS
Coding Frame 1
Product Name
leucine/isoleucine/valine transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) 3.62
Kyte-Doolittle Hydrophobicity Value -0.100
Molecular Weight (kDa) 28.1
Isoelectric Point (pI) 8.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001033 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4111

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 4.5e-21
Percent Identity: 28.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 4.5e-21
Percent Identity: 28.6

References

No references are associated with this feature.