Pseudomonas syringae pv. tomato DC3000, PSPTO_4218

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4218
NCBI Old Locus Tag	PSPTO4218
Name	Synonym: PSPTO4218
Replicon	chromosome
Genomic location	4750984 - 4751361 (- strand)

Cross-References

RefSeq	NP_793979.1
GI	28871360
Entrez	1185898
INSDC	AAO57674.1
NCBI Locus Tag	PSPTO_4218
NCBI Old Locus Tag	PSPTO4218
UniParc	UPI0000009231
UniProtKB Acc	Q87XG0
UniProtKB ID	Q87XG0_PSESM
UniRef100	UniRef100_Q87XG0
UniRef50	UniRef50_Q87XG0
UniRef90	UniRef90_Q87XG0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.46
Kyte-Doolittle Hydrophobicity Value	-0.104
Molecular Weight (kDa)	14.3
Isoelectric Point (pI)	7.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000743 (378 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4218

Human Homologs

References