Pseudomonas syringae pv. tomato DC3000, PSPTO_4231 (tctD)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4231
NCBI Old Locus Tag	PSPTO4231
Name	tctD Synonym: PSPTO4231
Replicon	chromosome
Genomic location	4764401 - 4765072 (- strand)

Cross-References

RefSeq	NP_793992.1
GI	28871373
Entrez	1185911
INSDC	AAO57687.1
NCBI Locus Tag	PSPTO_4231
NCBI Old Locus Tag	PSPTO4231
UniParc	UPI000000923E
UniProtKB Acc	Q87XE7
UniProtKB ID	Q87XE7_PSESM
UniRef100	UniRef100_Q87XE7
UniRef50	UniRef50_Q4KGR4
UniRef90	UniRef90_Q4KGR4

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding response regulator TctD
Synonyms
Evidence for Translation
Charge (pH 7)	-4.82
Kyte-Doolittle Hydrophobicity Value	-0.027
Molecular Weight (kDa)	24.6
Isoelectric Point (pI)	5.40

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 617 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000730 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4231 Search term: tctD Search term: DNA-binding response regulator TctD

Human Homologs

References