Pseudomonas syringae pv. tomato DC3000, PSPTO_4277

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4277
NCBI Old Locus TagPSPTO4277
Name
Synonym: PSPTO4277
Replicon chromosome
Genomic location 4818257 - 4819090 (+ strand)

Cross-References

RefSeq NP_794033.1
GI 28871414
Entrez 1185958
INSDC AAO57728.1
NCBI Locus Tag PSPTO_4277
NCBI Old Locus Tag PSPTO4277
UniParc UPI0000009262
UniProtKB Acc Q87XB1
UniProtKB ID Q87XB1_PSESM
UniRef100 UniRef100_Q87XB1
UniRef50 UniRef50_S0AHD8
UniRef90 UniRef90_Q87XB1

Product

Feature Type CDS
Coding Frame 1
Product Name
esterase/lipase/thioesterase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.84
Kyte-Doolittle Hydrophobicity Value 0.016
Molecular Weight (kDa) 29.9
Isoelectric Point (pI) 5.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 320 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001165 (2285 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4277

Human Homologs

Ensembl 110, assembly GRCh38.p14
arylacetamide deacetylase like 2 [Source:HGNC Symbol;Acc:HGNC:24427]
E-value: 2.3e-06
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
arylacetamide deacetylase like 2 [Source:HGNC Symbol;Acc:HGNC:24427]
E-value: 2.3e-06
Percent Identity: 34.8

References

No references are associated with this feature.