Pseudomonas syringae pv. tomato DC3000, PSPTO_4380

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4380
NCBI Old Locus Tag	PSPTO4380
Name	Synonym: PSPTO4380
Replicon	chromosome
Genomic location	4941398 - 4942156 (+ strand)

Cross-References

RefSeq	NP_794135.1
GI	28871516
Entrez	1186061
INSDC	AAO57830.1
NCBI Locus Tag	PSPTO_4380
NCBI Old Locus Tag	PSPTO4380
UniParc	UPI00000092C6
UniProtKB Acc	Q87X10
UniProtKB ID	Q87X10_PSESM
UniRef100	UniRef100_Q87X10
UniRef50	UniRef50_B0SSJ2
UniRef90	UniRef90_F3ILJ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	3-ketoacyl-(acyl-carrier-protein) reductase
Synonyms
Evidence for Translation
Charge (pH 7)	0.39
Kyte-Doolittle Hydrophobicity Value	0.142
Molecular Weight (kDa)	26.8
Isoelectric Point (pI)	7.34

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003017 (954 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4380 Search term: 3-ketoacyl-(acyl-carrier-protein) reductase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000263278 hydroxysteroid 17-beta dehydrogenase 14 [Source:HGNC Symbol;Acc:HGNC:23238] E-value: 8.5e-16 Percent Identity: 28.5

References