Pseudomonas syringae pv. tomato DC3000, PSPTO_4418

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4418
NCBI Old Locus Tag	PSPTO4418
Name	Synonym: PSPTO4418
Replicon	chromosome
Genomic location	4986848 - 4987717 (- strand)

Cross-References

RefSeq	NP_794172.1
GI	28871553
Entrez	1186099
INSDC	AAO57867.1
NCBI Locus Tag	PSPTO_4418
NCBI Old Locus Tag	PSPTO4418
UniParc	UPI00000092E9
UniProtKB Acc	Q87WX5
UniProtKB ID	Q87WX5_PSESM
UniRef100	UniRef100_Q87WX5
UniRef50	UniRef50_Q9HVZ3
UniRef90	UniRef90_Q87WX5

Product

Feature Type	CDS
Coding Frame	1
Product Name	tetrapyrrole methylase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.43
Kyte-Doolittle Hydrophobicity Value	0.058
Molecular Weight (kDa)	31.4
Isoelectric Point (pI)	5.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 575 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004012 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4418 Search term: tetrapyrrole methylase family protein

Human Homologs

References