Pseudomonas syringae pv. tomato DC3000, PSPTO_4434

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4434
NCBI Old Locus Tag	PSPTO4434
Name	Synonym: PSPTO4434
Replicon	chromosome
Genomic location	5002112 - 5002870 (- strand)

Cross-References

RefSeq	NP_794188.1
GI	28871569
Entrez	1186115
INSDC	AAO57883.1
NCBI Locus Tag	PSPTO_4434
NCBI Old Locus Tag	PSPTO4434
UniParc	UPI00000092F9
UniProtKB Acc	Q87WV9
UniProtKB ID	Q87WV9_PSESM
UniRef100	UniRef100_Q87WV9
UniRef50	UniRef50_P45371
UniRef90	UniRef90_Q87WV9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.96
Kyte-Doolittle Hydrophobicity Value	-0.085
Molecular Weight (kDa)	27.7
Isoelectric Point (pI)	5.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 327 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004034 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4434

Human Homologs

References