Pseudomonas syringae pv. tomato DC3000, PSPTO_4445

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4445
NCBI Old Locus Tag	PSPTO4445
Name	Synonym: PSPTO4445
Replicon	chromosome
Genomic location	5011313 - 5011780 (- strand)

Cross-References

RefSeq	NP_794199.1
GI	28871580
Entrez	1186126
INSDC	AAO57894.1
NCBI Locus Tag	PSPTO_4445
NCBI Old Locus Tag	PSPTO4445
UniParc	UPI0000009304
UniProtKB Acc	Q87WU8
UniProtKB ID	Q87WU8_PSESM
UniRef100	UniRef100_A0A038GE39
UniRef50	UniRef50_Q4KI79
UniRef90	UniRef90_D7I434

Product

Feature Type	CDS
Coding Frame	1
Product Name	mce-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.77
Kyte-Doolittle Hydrophobicity Value	0.272
Molecular Weight (kDa)	16.3
Isoelectric Point (pI)	5.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 255 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004043 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4445 Search term: mce-like protein

Human Homologs

References