Strain |
Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest |
Locus Tag |
PSPTO_4488
|
NCBI Old Locus Tag | PSPTO4488 |
Name |
truB
Synonym: PSPTO4488 |
Replicon | chromosome |
Genomic location | 5055111 - 5056028 (- strand) |
RefSeq | YP_001621409.1 |
GI | 162533085 |
Entrez | 1186169 |
INSDC | ABK79686.1 |
NCBI Locus Tag | PSPTO_4488 |
NCBI Old Locus Tag | PSPTO4488 |
UniParc | UPI0000E868BE |
UniProtKB Acc | A0PCI9 |
UniProtKB ID | A0PCI9_PSESM |
UniRef100 | UniRef100_A0PCI9 |
UniRef50 | UniRef50_Q4KIF4 |
UniRef90 | UniRef90_Q4KIF4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
tRNA pseudouridine synthase B
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.91 |
Kyte-Doolittle Hydrophobicity Value | -0.259 |
Molecular Weight (kDa) | 33.6 |
Isoelectric Point (pI) | 6.07 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004387 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_4488
Search term: truB
Search term: tRNA pseudouridine synthase B
|
Ensembl
110, assembly
GRCh38.p14
|
TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
E-value:
8.9e-36
Percent Identity:
40.5
|