Pseudomonas syringae pv. tomato DC3000, PSPTO_4546

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4546
NCBI Old Locus Tag	PSPTO4546
Name	Synonym: PSPTO4546
Replicon	chromosome
Genomic location	5135614 - 5135853 (- strand)

Cross-References

RefSeq	NP_794299.1
GI	28871680
Entrez	1186229
INSDC	AAO57994.1
NCBI Locus Tag	PSPTO_4546
NCBI Old Locus Tag	PSPTO4546
UniParc	UPI0000009366
UniProtKB Acc	Q87WK0
UniProtKB ID	Q87WK0_PSESM
UniRef100	UniRef100_Q87WK0
UniRef50	UniRef50_Q87WK0
UniRef90	UniRef90_Q87WK0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.46
Kyte-Doolittle Hydrophobicity Value	0.446
Molecular Weight (kDa)	9.0
Isoelectric Point (pI)	10.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018694 (22 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4546

Human Homologs

References