Pseudomonas syringae pv. tomato DC3000, PSPTO_4640 (radA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4640
NCBI Old Locus Tag	PSPTO4640
Name	radA Synonym: PSPTO4640
Replicon	chromosome
Genomic location	5243215 - 5244582 (- strand)

Cross-References

RefSeq	NP_794391.1
GI	28871772
Entrez	1186323
INSDC	AAO58086.1
NCBI Locus Tag	PSPTO_4640
NCBI Old Locus Tag	PSPTO4640
UniParc	UPI00000093BD
UniProtKB Acc	Q87WB3
UniProtKB ID	Q87WB3_PSESM
UniRef100	UniRef100_Q87WB3
UniRef50	UniRef50_P45266
UniRef90	UniRef90_P96963

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA repair protein RadA
Synonyms
Evidence for Translation
Charge (pH 7)	1.76
Kyte-Doolittle Hydrophobicity Value	0.001
Molecular Weight (kDa)	48.8
Isoelectric Point (pI)	7.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 576 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004264 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4640 Search term: radA Search term: DNA repair protein RadA

Human Homologs

References