Pseudomonas syringae pv. tomato DC3000, PSPTO_4669

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4669
NCBI Old Locus Tag	PSPTO4669
Name	Synonym: PSPTO4669
Replicon	chromosome
Genomic location	5272223 - 5273314 (+ strand)

Cross-References

RefSeq	NP_794420.1
GI	28871801
Entrez	1186352
INSDC	AAO58115.1
NCBI Locus Tag	PSPTO_4669
NCBI Old Locus Tag	PSPTO4669
UniParc	UPI00000093D9
UniProtKB Acc	Q87W85
UniProtKB ID	Q87W85_PSESM
UniRef100	UniRef100_Q87W85
UniRef50	UniRef50_Q4K5J9
UniRef90	UniRef90_Q87W85

Product

Feature Type	CDS
Coding Frame	1
Product Name	endonuclease/exonuclease/phosphatase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.17
Kyte-Doolittle Hydrophobicity Value	-0.283
Molecular Weight (kDa)	40.8
Isoelectric Point (pI)	6.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 33 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001720 (440 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4669 Search term: endonuclease/exonuclease/phosphatase family protein

Human Homologs

References