Pseudomonas syringae pv. tomato DC3000, PSPTO_4832

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4832
NCBI Old Locus Tag	PSPTO4832
Name	Synonym: PSPTO4832
Replicon	chromosome
Genomic location	5470302 - 5472320 (+ strand)

Cross-References

RefSeq	NP_794566.1
GI	28871947
Entrez	1186515
INSDC	AAO58261.1
NCBI Locus Tag	PSPTO_4832
NCBI Old Locus Tag	PSPTO4832
UniParc	UPI0000009459
UniProtKB Acc	Q87VV3
UniProtKB ID	Q87VV3_PSESM
UniRef100	UniRef100_Q87VV3
UniRef50	UniRef50_Q4ZN70
UniRef90	UniRef90_Q87VV3

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.96
Kyte-Doolittle Hydrophobicity Value	0.439
Molecular Weight (kDa)	68.2
Isoelectric Point (pI)	8.47

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 29 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003898 (429 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4832

Human Homologs

References