Pseudomonas syringae pv. tomato DC3000, PSPTO_4841

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4841
NCBI Old Locus Tag	PSPTO4841
Name	Synonym: PSPTO4841
Replicon	chromosome
Genomic location	5480837 - 5481208 (+ strand)

Cross-References

RefSeq	NP_794575.1
GI	28871956
Entrez	1186524
INSDC	AAO58270.1
NCBI Locus Tag	PSPTO_4841
NCBI Old Locus Tag	PSPTO4841
UniParc	UPI0000009462
UniProtKB Acc	Q87VU4
UniProtKB ID	Q87VU4_PSESM
UniRef100	UniRef100_Q87VU4
UniRef50	UniRef50_Q4KIW3
UniRef90	UniRef90_S3MLP1

Product

Feature Type	CDS
Coding Frame	1
Product Name	translation initiation factor Sui1
Synonyms
Evidence for Translation
Charge (pH 7)	6.32
Kyte-Doolittle Hydrophobicity Value	-0.291
Molecular Weight (kDa)	12.8
Isoelectric Point (pI)	9.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004470 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4841 Search term: translation initiation factor Sui1

Human Homologs

References