Pseudomonas syringae pv. tomato DC3000, PSPTO_4881

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4881
NCBI Old Locus Tag	PSPTO4881
Name	Synonym: PSPTO4881
Replicon	chromosome
Genomic location	5528813 - 5529274 (+ strand)

Cross-References

RefSeq	NP_794615.1
GI	28871996
Entrez	1186564
INSDC	AAO58310.1
NCBI Locus Tag	PSPTO_4881
NCBI Old Locus Tag	PSPTO4881
UniParc	UPI000000948A
UniProtKB Acc	Q87VQ4
UniProtKB ID	Q87VQ4_PSESM
UniRef100	UniRef100_Q87VQ4
UniRef50	UniRef50_Q87VQ4
UniRef90	UniRef90_Q87VQ4

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.64
Kyte-Doolittle Hydrophobicity Value	-0.015
Molecular Weight (kDa)	16.9
Isoelectric Point (pI)	6.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 178 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001881 (481 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4881

Human Homologs

References