Pseudomonas syringae pv. tomato DC3000, PSPTO_4912

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4912
NCBI Old Locus Tag	PSPTO4912
Name	Synonym: PSPTO4912
Replicon	chromosome
Genomic location	5560239 - 5560811 (+ strand)

Cross-References

RefSeq	NP_794645.1
GI	28872026
Entrez	1186595
INSDC	AAO58340.1
NCBI Locus Tag	PSPTO_4912
NCBI Old Locus Tag	PSPTO4912
UniParc	UPI00000094A8
UniProtKB Acc	Q87VM4
UniProtKB ID	Q87VM4_PSESM
UniRef100	UniRef100_Q87VM4
UniRef50	UniRef50_Q4KJ35
UniRef90	UniRef90_Q48DC6

Product

Feature Type	CDS
Coding Frame	1
Product Name	urease accessory protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.63
Kyte-Doolittle Hydrophobicity Value	0.977
Molecular Weight (kDa)	18.9
Isoelectric Point (pI)	8.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 101 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004518 (459 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4912 Search term: urease accessory protein

Human Homologs

References