Pseudomonas syringae pv. tomato DC3000, PSPTO_4918 (braD)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4918
NCBI Old Locus Tag	PSPTO4918
Name	braD Synonym: PSPTO4918
Replicon	chromosome
Genomic location	5566645 - 5567559 (- strand)

Cross-References

RefSeq	NP_794651.1
GI	28872032
Entrez	1186601
INSDC	AAO58346.1
NCBI Locus Tag	PSPTO_4918
NCBI Old Locus Tag	PSPTO4918
UniParc	UPI00000094AE
UniProtKB Acc	Q87VL8
UniProtKB ID	Q87VL8_PSESM
UniRef100	UniRef100_A0A038G9D1
UniRef50	UniRef50_C0QFK4
UniRef90	UniRef90_Q48NX8

Product

Feature Type	CDS
Coding Frame	1
Product Name	high-affinity branched-chain amino acid ABC transporter, permease protein BraD
Synonyms
Evidence for Translation
Charge (pH 7)	7.18
Kyte-Doolittle Hydrophobicity Value	0.911
Molecular Weight (kDa)	32.6
Isoelectric Point (pI)	9.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 439 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004531 (502 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4918 Search term: braD Search term: high-affinity branched-chain amino acid ABC transporter, permease protein BraD

Human Homologs

References