Pseudomonas syringae pv. tomato DC3000, PSPTO_4949

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4949
NCBI Old Locus TagPSPTO4949
Name
Synonym: PSPTO4949
Replicon chromosome
Genomic location 5609673 - 5610284 (- strand)

Cross-References

RefSeq NP_794682.1
GI 28872063
Entrez 1186634
INSDC AAO58377.1
NCBI Locus Tag PSPTO_4949
NCBI Old Locus Tag PSPTO4949
UniParc UPI00000094CD
UniProtKB Acc Q87VI7
UniProtKB ID Q87VI7_PSESM
UniRef100 UniRef100_A0A038G957
UniRef50 UniRef50_E2XKE2
UniRef90 UniRef90_Q48P09

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.00
Kyte-Doolittle Hydrophobicity Value 0.991
Molecular Weight (kDa) 22.3
Isoelectric Point (pI) 7.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 368 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000999 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4949
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.