Pseudomonas syringae pv. tomato DC3000, PSPTO_5051

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5051
NCBI Old Locus Tag	PSPTO5051
Name	Synonym: PSPTO5051
Replicon	chromosome
Genomic location	5750148 - 5750741 (+ strand)

Cross-References

RefSeq	NP_794784.1
GI	28872165
Entrez	1186736
INSDC	AAO58479.1
NCBI Locus Tag	PSPTO_5051
NCBI Old Locus Tag	PSPTO5051
UniParc	UPI0000009530
UniProtKB Acc	Q87V88
UniProtKB ID	NTPA_PSESM
UniRef100	UniRef100_Q87V88
UniRef50	UniRef50_Q87V88
UniRef90	UniRef90_Q87V88

Product

Feature Type	CDS
Coding Frame	1
Product Name	Ham1 protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.89
Kyte-Doolittle Hydrophobicity Value	-0.080
Molecular Weight (kDa)	21.1
Isoelectric Point (pI)	5.62

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 644 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000378 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5051 Search term: Ham1 protein

Human Homologs

References