Pseudomonas syringae pv. tomato DC3000, PSPTO_5231

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5231
NCBI Old Locus TagPSPTO5231
Name
Synonym: PSPTO5231
Replicon chromosome
Genomic location 5951327 - 5952304 (+ strand)

Cross-References

RefSeq NP_794962.1
GI 28872343
Entrez 1186916
INSDC AAO58657.1
NCBI Locus Tag PSPTO_5231
NCBI Old Locus Tag PSPTO5231
UniParc UPI00000095DD
UniProtKB Acc Q87UR5
UniProtKB ID Q87UR5_PSESM
UniRef100 UniRef100_Q87UR5
UniRef50 UniRef50_A4YJY4
UniRef90 UniRef90_Q48PR7

Product

Feature Type CDS
Coding Frame 1
Product Name
oxidoreductase zinc-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.07
Kyte-Doolittle Hydrophobicity Value 0.170
Molecular Weight (kDa) 34.3
Isoelectric Point (pI) 5.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 576 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004815 (517 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5231

Human Homologs

Ensembl 110, assembly GRCh38.p14
crystallin zeta [Source:HGNC Symbol;Acc:HGNC:2419]
E-value: 9.2e-47
Percent Identity: 36.1
Ensembl 110, assembly GRCh38.p14
crystallin zeta [Source:HGNC Symbol;Acc:HGNC:2419]
E-value: 9.2e-47
Percent Identity: 36.1

References

No references are associated with this feature.