Pseudomonas syringae pv. tomato DC3000, PSPTO_5273

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5273
NCBI Old Locus Tag	PSPTO5273
Name	Synonym: PSPTO5273
Replicon	chromosome
Genomic location	5995891 - 5996721 (+ strand)

Cross-References

RefSeq	NP_795004.1
GI	28872385
Entrez	1186958
INSDC	AAO58699.1
NCBI Locus Tag	PSPTO_5273
NCBI Old Locus Tag	PSPTO5273
UniParc	UPI0000009607
UniProtKB Acc	Q87UM3
UniProtKB ID	Q87UM3_PSESM
UniRef100	UniRef100_Q87UM3
UniRef50	UniRef50_D7I684
UniRef90	UniRef90_D7I684

Product

Feature Type	CDS
Coding Frame	1
Product Name	histidine ABC transporter, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.86
Kyte-Doolittle Hydrophobicity Value	-0.074
Molecular Weight (kDa)	30.7
Isoelectric Point (pI)	9.38

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004691 (971 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5273 Search term: histidine ABC transporter, ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000359245 ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34] E-value: 3.8e-25 Percent Identity: 33.0

References