Pseudomonas syringae pv. tomato DC3000, PSPTO_5357

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5357
NCBI Old Locus Tag	PSPTO5357
Name	Synonym: PSPTO5357
Replicon	chromosome
Genomic location	6089958 - 6090731 (+ strand)

Cross-References

RefSeq	NP_795087.1
GI	28872468
Entrez	1187043
INSDC	AAO58782.1
NCBI Locus Tag	PSPTO_5357
NCBI Old Locus Tag	PSPTO5357
UniParc	UPI0000009659
UniProtKB Acc	Q87UE2
UniProtKB ID	Q87UE2_PSESM
UniRef100	UniRef100_A0A038GKG3
UniRef50	UniRef50_D7I6D4
UniRef90	UniRef90_W6RL63

Product

Feature Type	CDS
Coding Frame	1
Product Name	amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.62
Kyte-Doolittle Hydrophobicity Value	-0.159
Molecular Weight (kDa)	28.4
Isoelectric Point (pI)	7.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004745 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5357 Search term: amino acid ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000496956 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 9.5e-23 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000392983 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 9.5e-23 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000265723 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 9.5e-23 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000352135 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 9.5e-23 Percent Identity: 31.8

References