Pseudomonas syringae pv. tomato DC3000, PSPTO_5499 (aspA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5499
NCBI Old Locus TagPSPTO5499
Name
aspA
Synonym: PSPTO5499
Replicon chromosome
Genomic location 6263605 - 6265029 (+ strand)

Cross-References

RefSeq NP_795223.1
GI 28872604
Entrez 1187191
INSDC AAO58918.1
NCBI Locus Tag PSPTO_5499
NCBI Old Locus Tag PSPTO5499
UniParc UPI00000096D7
UniProtKB Acc Q87U16
UniProtKB ID Q87U16_PSESM
UniRef100 UniRef100_Q87U16
UniRef50 UniRef50_P07346
UniRef90 UniRef90_P07346

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartate ammonia-lyase
Synonyms
Evidence for Translation
Charge (pH 7) -9.22
Kyte-Doolittle Hydrophobicity Value 0.042
Molecular Weight (kDa) 51.2
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 625 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004982 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5499
Search term: aspA

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value: 6.3e-97
Percent Identity: 40.7

References

No references are associated with this feature.