Pseudomonas syringae pv. tomato DC3000, PSPTO_5503

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5503
NCBI Old Locus TagPSPTO5503
Name
Synonym: PSPTO5503
Replicon chromosome
Genomic location 6268881 - 6270092 (- strand)

Cross-References

RefSeq NP_795227.1
GI 28872608
Entrez 1187195
INSDC AAO58922.1
NCBI Locus Tag PSPTO_5503
NCBI Old Locus Tag PSPTO5503
UniParc UPI00000096DB
UniProtKB Acc Q87U12
UniProtKB ID Q87U12_PSESM
UniRef100 UniRef100_Q87U12
UniRef50 UniRef50_A0A081MFN7
UniRef90 UniRef90_Q87U12

Product

Feature Type CDS
Coding Frame 1
Product Name
YeeE/YedE family protein
Synonyms
Evidence for Translation
Charge (pH 7) 17.33
Kyte-Doolittle Hydrophobicity Value 0.886
Molecular Weight (kDa) 42.1
Isoelectric Point (pI) 11.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 147 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002043 (727 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5503

Human Homologs

References

No references are associated with this feature.