Pseudomonas syringae pv. tomato DC3000, PSPTO_5519

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5519
NCBI Old Locus TagPSPTO5519
Name
Synonym: PSPTO5519
Replicon chromosome
Genomic location 6285870 - 6287633 (- strand)

Cross-References

RefSeq NP_795243.1
GI 28872624
Entrez 1187211
INSDC AAO58938.1
NCBI Locus Tag PSPTO_5519
NCBI Old Locus Tag PSPTO5519
UniParc UPI00000096E9
UniProtKB Acc Q87TZ8
UniProtKB ID Q87TZ8_PSESM
UniRef100 UniRef100_Q87TZ8
UniRef50 UniRef50_I3CFY2
UniRef90 UniRef90_Q87TZ8

Product

Feature Type CDS
Coding Frame 1
Product Name
sodium/hydrogen exchanger family protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.01
Kyte-Doolittle Hydrophobicity Value 1.021
Molecular Weight (kDa) 63.8
Isoelectric Point (pI) 8.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 502 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005056 (822 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5519

Human Homologs

References

No references are associated with this feature.