Pseudomonas syringae pv. tomato DC3000, PSPTO_5525

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5525
NCBI Old Locus Tag	PSPTO5525
Name	Synonym: PSPTO5525
Replicon	chromosome
Genomic location	6291286 - 6291936 (- strand)

Cross-References

RefSeq	NP_795249.1
GI	28872630
Entrez	1187217
INSDC	AAO58944.1
NCBI Locus Tag	PSPTO_5525
NCBI Old Locus Tag	PSPTO5525
UniParc	UPI00000096EF
UniProtKB Acc	Q87TZ2
UniProtKB ID	Q87TZ2_PSESM
UniRef100	UniRef100_Q87TZ2
UniRef50	UniRef50_Q9HT40
UniRef90	UniRef90_Q87TZ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.44
Kyte-Doolittle Hydrophobicity Value	-0.117
Molecular Weight (kDa)	23.9
Isoelectric Point (pI)	6.15

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005067 (503 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5525

Human Homologs

References