Pseudomonas syringae pv. tomato DC3000, PSPTO_5559

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5559
NCBI Old Locus Tag	PSPTO5559
Name	Synonym: PSPTO5559
Replicon	chromosome
Genomic location	6333723 - 6334697 (+ strand)

Cross-References

RefSeq	NP_795283.1
GI	28872664
Entrez	1187251
INSDC	AAO58978.1
NCBI Locus Tag	PSPTO_5559
NCBI Old Locus Tag	PSPTO5559
UniParc	UPI000000970E
UniProtKB Acc	Q87TW1
UniProtKB ID	Q87TW1_PSESM
UniRef100	UniRef100_Q87TW1
UniRef50	UniRef50_G8SHW8
UniRef90	UniRef90_Q48BI7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-11.44
Kyte-Doolittle Hydrophobicity Value	-0.120
Molecular Weight (kDa)	35.4
Isoelectric Point (pI)	5.07

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 429 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003294 (454 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5559

Human Homologs

References