Pseudomonas syringae pv. tomato DC3000, PSPTO_5602 (atpH)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5602
NCBI Old Locus Tag	PSPTO5602
Name	atpH Synonym: PSPTO5602
Replicon	chromosome
Genomic location	6385233 - 6385769 (- strand)

Cross-References

RefSeq	NP_795320.1
GI	28872701
Entrez	1187294
INSDC	AAO59015.1
NCBI Locus Tag	PSPTO_5602
NCBI Old Locus Tag	PSPTO5602
UniParc	UPI000000972C
UniProtKB Acc	Q87TT1
UniProtKB ID	ATPD_PSESM
UniRef100	UniRef100_Q87TT1
UniRef50	UniRef50_Q87TT1
UniRef90	UniRef90_Q87TT1

Product

Feature Type	CDS
Coding Frame	1
Product Name	F0F1 ATP synthase subunit delta
Synonyms
Evidence for Translation
Charge (pH 7)	-2.07
Kyte-Doolittle Hydrophobicity Value	-0.072
Molecular Weight (kDa)	19.3
Isoelectric Point (pI)	6.12

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005088 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5602 Search term: atpH Search term: F0F1 ATP synthase subunit delta

Human Homologs

References