Pseudomonas syringae pv. tomato DC3000, PSPTO_5614 (rnpA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5614
NCBI Old Locus Tag	PSPTO5614
Name	rnpA Synonym: PSPTO5614
Replicon	chromosome
Genomic location	6396329 - 6396730 (- strand)

Cross-References

RefSeq	NP_795332.1
GI	28872713
Entrez	1187306
INSDC	AAO59027.1
NCBI Locus Tag	PSPTO_5614
NCBI Old Locus Tag	PSPTO5614
UniParc	UPI0000009738
UniProtKB Acc	Q87TR9
UniProtKB ID	RNPA_PSESM
UniRef100	UniRef100_Q87TR9
UniRef50	UniRef50_P0A167
UniRef90	UniRef90_Q87TR9

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonuclease P protein component
Synonyms
Evidence for Translation
Charge (pH 7)	10.95
Kyte-Doolittle Hydrophobicity Value	-0.680
Molecular Weight (kDa)	15.2
Isoelectric Point (pI)	11.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005100 (481 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5614 Search term: rnpA Search term: ribonuclease P protein component

Human Homologs

References