Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0035 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0035
Name
trpA
Replicon chromosome
Genomic location 40542 - 41354 (- strand)

Cross-References

RefSeq YP_272349.1
GI 71733716
EC Number 4.2.1.20
Entrez 3556006
INSDC AAZ33480.1
NCBI Locus Tag PSPPH_0035
UniParc UPI0000575034
UniProtKB Acc Q48QG7
UniProtKB ID TRPA_PSE14
UniRef100 UniRef100_Q48QG7
UniRef50 UniRef50_P07344
UniRef90 UniRef90_Q88B60

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -8.07
Kyte-Doolittle Hydrophobicity Value 0.161
Molecular Weight (kDa) 28.5
Isoelectric Point (pI) 4.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0035
Search term: trpA

Human Homologs

References

No references are associated with this feature.