Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0155
Name
Replicon chromosome
Genomic location 182883 - 184157 (+ strand)

Cross-References

RefSeq YP_272463.1
GI 71733790
Entrez 3556085
INSDC AAZ33554.1
NCBI Locus Tag PSPPH_0155
UniParc UPI00005750A1
UniProtKB Acc Q48Q53
UniProtKB ID Q48Q53_PSE14
UniRef100 UniRef100_F3EM01
UniRef50 UniRef50_W8YMV7
UniRef90 UniRef90_S3MM29

Product

Feature Type CDS
Coding Frame 1
Product Name
OprD family outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -9.52
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 46.2
Isoelectric Point (pI) 4.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 15 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0155

Human Homologs

References

No references are associated with this feature.