Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0203

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0203
Name
Replicon chromosome
Genomic location 240019 - 240798 (- strand)

Cross-References

RefSeq YP_272508.1
GI 71737295
Entrez 3559698
INSDC AAZ37059.1
NCBI Locus Tag PSPPH_0203
UniParc UPI0000394F98
UniProtKB Acc Q48Q11
UniProtKB ID Q48Q11_PSE14
UniRef100 UniRef100_F3EFL4
UniRef50 UniRef50_Q49P76
UniRef90 UniRef90_V6JC47

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -4.85
Kyte-Doolittle Hydrophobicity Value -0.428
Molecular Weight (kDa) 29.9
Isoelectric Point (pI) 4.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2MYI RNA BINDING PROTEIN 01/25/15 Solution Structure of Crc from P. syringae Lz4W Pseudomonas sp. Lz4W NOT SOLUTION NMR 95.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 492 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004901 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0203

Human Homologs

References

No references are associated with this feature.