Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0515
Name
Replicon chromosome
Genomic location 601110 - 601889 (+ strand)

Cross-References

RefSeq YP_272817.1
GI 71733524
Entrez 3555811
INSDC AAZ33288.1
NCBI Locus Tag PSPPH_0515
UniParc UPI00005751EC
UniProtKB Acc Q48P52
UniProtKB ID Q48P52_PSE14
UniRef100 UniRef100_Q48P52
UniRef50 UniRef50_G8Q3T9
UniRef90 UniRef90_D7HU65

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.34
Kyte-Doolittle Hydrophobicity Value -0.505
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 9.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004614 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0515

Human Homologs

References

No references are associated with this feature.