Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0557 (orn)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0557
Name
orn
Replicon chromosome
Genomic location 655342 - 655878 (+ strand)

Cross-References

RefSeq YP_272859.1
GI 71733293
EC Number 3.1.-.-
Entrez 3555570
INSDC AAZ33057.1
NCBI Locus Tag PSPPH_0557
UniParc UPI0000575215
UniProtKB Acc Q48P10
UniProtKB ID ORN_PSE14
UniRef100 UniRef100_Q48P10
UniRef50 UniRef50_Q4KJ81
UniRef90 UniRef90_Q87VI6

Product

Feature Type CDS
Coding Frame 1
Product Name
oligoribonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -6.62
Kyte-Doolittle Hydrophobicity Value -0.466
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 5.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004566 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0557
Search term: orn
Search term: oligoribonuclease

Human Homologs

Ensembl 110, assembly GRCh38.p14
RNA exonuclease 2 [Source:HGNC Symbol;Acc:HGNC:17851]
E-value: 3.6e-45
Percent Identity: 50.6

References

No references are associated with this feature.