Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1303 (secF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1303
Name
secF
Replicon chromosome
Genomic location 1515294 - 1516205 (+ strand)

Cross-References

RefSeq YP_273561.1
GI 71736135
Entrez 3558501
INSDC AAZ35899.1
NCBI Locus Tag PSPPH_1303
UniParc UPI00003952F4
UniProtKB Acc Q48M11
UniProtKB ID Q48M11_PSE14
UniRef100 UniRef100_F3EAB7
UniRef50 UniRef50_E9RGS4
UniRef90 UniRef90_A0A038GII8

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecF
Synonyms
Evidence for Translation
Charge (pH 7) -6.28
Kyte-Doolittle Hydrophobicity Value 0.628
Molecular Weight (kDa) 33.0
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001846 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1303
Search term: secF

Human Homologs

References

No references are associated with this feature.