Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1353 (ffh)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1353
Name
ffh
Replicon chromosome
Genomic location 1569934 - 1571439 (+ strand)

Cross-References

RefSeq YP_273611.1
GI 71738105
Entrez 3560539
NCBI Locus Tag PSPPH_1353

Product

Feature Type CDS
Coding Frame 1
Product Name
signal recognition particle protein
Synonyms
Evidence for Translation
Charge (pH 7) 18.46
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 53954.5
Isoelectric Point (pI) 10.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001936 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1353
Search term: ffh

Human Homologs

Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.2e-40
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.2e-40
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.2e-40
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.2e-40
Percent Identity: 29.6

References

No references are associated with this feature.