Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1549

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1549
Name
Replicon chromosome
Genomic location 1801979 - 1802911 (+ strand)

Cross-References

RefSeq YP_273801.1
GI 71734497
Entrez 3556806
INSDC AAZ34261.1
NCBI Locus Tag PSPPH_1549
UniParc UPI0000575574
UniProtKB Acc Q48LC4
UniProtKB ID Q48LC4_PSE14
UniRef100 UniRef100_Q48LC4
UniRef50 UniRef50_D7HXF1
UniRef90 UniRef90_D7HXF1

Product

Feature Type CDS
Coding Frame 1
Product Name
D-isomer specific 2-hydroxyacid dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.14
Kyte-Doolittle Hydrophobicity Value 0.015
Molecular Weight (kDa) 34.3
Isoelectric Point (pI) 5.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001240 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1549

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.6

References

No references are associated with this feature.