Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1788

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1788
Name
Replicon chromosome
Genomic location 2094029 - 2095171 (+ strand)

Cross-References

RefSeq YP_274022.2
GI 161611327
Entrez 3560124
INSDC AAZ37470.1
NCBI Locus Tag PSPPH_1788
UniParc UPI00015888A2
UniProtKB Acc Q48KQ3
UniProtKB ID PDXB_PSE14
UniRef100 UniRef100_Q48KQ3
UniRef50 UniRef50_Q48KQ3
UniRef90 UniRef90_Q48KQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
erythronate-4-phosphate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -9.04
Kyte-Doolittle Hydrophobicity Value 0.043
Molecular Weight (kDa) 41173.6
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 632 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001304 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1788

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.3e-17
Percent Identity: 26.6

References

No references are associated with this feature.