Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1880
Name
Replicon chromosome
Genomic location 2181745 - 2181951 (+ strand)

Cross-References

RefSeq YP_274109.1
GI 71736012
Entrez 3558376
INSDC AAZ35776.1
NCBI Locus Tag PSPPH_1880
UniParc UPI000057569C
UniProtKB Acc Q48KG6
UniProtKB ID Q48KG6_PSE14
UniRef100 UniRef100_Q48KG6
UniRef50 UniRef50_Q48KG6
UniRef90 UniRef90_Q48KG6

Product

Feature Type CDS
Coding Frame 1
Product Name
prophage PSPPH02, tail protein X
Synonyms
Evidence for Translation
Charge (pH 7) -4.84
Kyte-Doolittle Hydrophobicity Value 0.260
Molecular Weight (kDa) 7240.2
Isoelectric Point (pI) 4.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 43 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000610 (300 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1880

Human Homologs

References

No references are associated with this feature.