Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1916

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1916
Name
Replicon chromosome
Genomic location 2233549 - 2234313 (- strand)

Cross-References

RefSeq YP_274144.1
GI 71736080
Entrez 3558444
INSDC AAZ35844.1
NCBI Locus Tag PSPPH_1916
UniParc UPI00005756BD
UniProtKB Acc Q48KD1
UniProtKB ID Q48KD1_PSE14
UniRef100 UniRef100_Q48KD1
UniRef50 UniRef50_D7HYC2
UniRef90 UniRef90_D7HYC2

Product

Feature Type CDS
Coding Frame 1
Product Name
cation ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.38
Kyte-Doolittle Hydrophobicity Value -0.016
Molecular Weight (kDa) 27.5
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003124 (478 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1916

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value: 1.0e-08
Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value: 1.0e-08
Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value: 1.0e-08
Percent Identity: 26.7

References

No references are associated with this feature.