Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2192
Name
Replicon chromosome
Genomic location 2548129 - 2548965 (- strand)

Cross-References

RefSeq YP_274405.1
GI 71738035
Entrez 3560466
INSDC AAZ37799.1
NCBI Locus Tag PSPPH_2192
UniParc UPI00005757B3
UniProtKB Acc Q48JM3
UniProtKB ID Q48JM3_PSE14
UniRef100 UniRef100_Q48JM3
UniRef50 UniRef50_Q880H5
UniRef90 UniRef90_Q48JM3

Product

Feature Type CDS
Coding Frame 1
Product Name
pirin
Synonyms
Evidence for Translation
Charge (pH 7) 0.12
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 7.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 384 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018222 (46 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2192
Search term: pirin

Human Homologs

References

No references are associated with this feature.