Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2444

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2444
Name
Replicon chromosome
Genomic location 2825240 - 2826157 (- strand)

Cross-References

RefSeq YP_274642.1
GI 71734979
Entrez 3557303
INSDC AAZ34743.1
NCBI Locus Tag PSPPH_2444
UniParc UPI000057589A
UniProtKB Acc Q48IY9
UniProtKB ID Q48IY9_PSE14
UniRef100 UniRef100_Q48IY9
UniRef50 UniRef50_D5BMG8
UniRef90 UniRef90_Q48IY9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.66
Kyte-Doolittle Hydrophobicity Value -0.081
Molecular Weight (kDa) 34216.7
Isoelectric Point (pI) 6.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 534 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000217 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2444

Human Homologs

References

No references are associated with this feature.