Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3170
Name
Replicon chromosome
Genomic location 3677851 - 3678420 (- strand)

Cross-References

RefSeq YP_275333.1
GI 71736183
Entrez 3558550
INSDC AAZ35947.1
NCBI Locus Tag PSPPH_3170
UniParc UPI0000575B39
UniProtKB Acc Q48H00
UniProtKB ID Q48H00_PSE14
UniRef100 UniRef100_Q48H00
UniRef50 UniRef50_Q9I3Y5
UniRef90 UniRef90_Q4ZRE0

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.37
Kyte-Doolittle Hydrophobicity Value -0.233
Molecular Weight (kDa) 21112.7
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 232 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000594 (1255 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3170

Human Homologs

References

No references are associated with this feature.